Grhl2 chip-seq
WebDec 6, 2016 · We performed GRHL2 ChIP-seq in MCF-7 cells in triplicate, and GRHL2 peaks were called using MACS, revealing 30,143 GRHL2 binding sites. GRHL2 binding was overlaid with MLL3 and FOXA1 binding, revealing 5,585 regions that were occupied by all three factors with significant overlap with ERα ( Figures 3 A and S3 ). WebJul 24, 2024 · GRHL2 knockdown results in CpG methylation gain and nucleosomal remodeling (reduction in permissive marks H3K4me3 and H3K27ac; elevated repressive mark H3K27me3), resembling the changes observed across progressive EMT states.
Grhl2 chip-seq
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WebMay 15, 2024 · In vivo genome-wide examination of binding sites of the transcription factor GRHL2 by ChIP-seq using wild-type murine E17.5 placenta tissue. Two samples in total: … Webp-value: 1e-2421: log p-value:-5.577e+03: FDR: NA: Information Content per bp: 1.541: Number of Target Sequences with motif: 2291.0: Percentage of Target Sequences with …
WebMay 13, 2024 · Background: VirtUaL ChIP-seq Analysis through Networks (VULCAN) infers regulatory interactions of transcription factors by overlaying networks generated from … WebGSM1125984: C 44 GRHL2 ChIPseq; Homo sapiens; ChIP-Seq Sample information curated by ChIP-Atlas Antigen Antigen Class TFs and others Antigen GRHL2. Cell type …
WebOct 19, 2024 · Two GRHL2 ChIP-seq data sets independently showed a potential GRHL2 binding peak ... In contrast, no bands of CLDN4 and ESRP1 were detected in the GRHL2 antibody group from the ChIP of Beas-2b/M ... Web本发明涉及多能干细胞领域。具体而言，本发明涉及一种多能干细胞，产生所述多能干细胞的方法，以及所述多能干细胞用于 ...
WebAug 9, 2024 · The use of ChIP-seq peaks as positive training data can be problematic due to high degrees of indirectly bound regions, and often poor overlap between experimental conditions. ... binding of GRHL2 and SOX2 is determined by nucleosome positioning; and binding of PPARG and HIF1A depends on other transcription factors. In conclusion, meta …
WebApr 30, 2024 · Through whole-genome ChIP-seq analysis, ... On the contrary, GRHL2 was highly expressed in liver cancer tissues, and its expression level was closely related to the tumor size, ... rivers vegetable oil company ltdhttp://chip-atlas.org/view?id=SRX268452 smokey\u0027s on the bayWebJun 8, 2015 · My team utilizes HPC and cloud to perform data mining of NGS data, including single-cell or bulk RNA-seq, ChIP-seq, ATAC-seq, GWAS, and early discovery work in animal and cell line models. river sustainabilityWebJan 28, 2024 · The intersection of ChIP-Seq analysis in 3 luminal and 3 basal A cell lines identified conserved GRHL2 binding sites for both subtypes. A pathway analysis of ChIP-seq data revealed cell-cell junction regulation and epithelial migration as well as epithelial proliferation, as candidate GRHL2-regulated processes and further analysis of hub genes ... smokey\u0027s on the bay green bayWebSearch ACM Digital Library. Search Search. Advanced Search river sushi red wingWebMar 15, 2015 · A comparison of our GRHL2 ChIP-seq data with GRHL2 ChIP-seq data recently generated using primary human airway lung epithelial cells in culture (Gao et al., … smokey\u0027s neighborhood grillWebMar 17, 2024 · GRHL2-dependent genes were enriched in the SE population identified by scRNA-seq ( Figure 1 G). Of interest, GRHL2-repressed genes were expressed primarily in the small neural population. Loss of GRHL2 resulted in a striking reduction in the SE at the expense of 4-fold expansion of the neuroectoderm ( Figures 1 H–1J). river sushi red wing mn menu